PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG047650.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 826aa    MW: 92719.1 Da    PI: 10.2088
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG047650.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.47e-08296340246
                       SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       ++WT+ E+++l+  v++ G+++W  Ia  +g+ Rt+ qc  r+q 
  TRIDC5BG047650.5 296 NAWTACEEKRLILTVQEKGMHNWINIAVALGTQRTPFQCLARYQR 340
                       68*****************************99**********96 PP
2Myb_DNA-binding43.29e-14349393248
                       SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                         WT+eEd++l+ av+ +G + W ++++ +  gR ++qc +r++k l
  TRIDC5BG047650.5 349 RTWTKEEDLQLLAAVQTYGCN-WQLVSANLV-GRIGNQCSNRYRKTL 393
                       68*****************88.*********.************975 PP
3Myb_DNA-binding43.95.5e-14401446248
                       SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                       grW+++Ed++l   vk++ +g+W++Ia+ ++ gRt  qc +rw+++l
  TRIDC5BG047650.5 401 GRWSEDEDKRLMVSVKLFRSGSWNKIAQFVP-GRTQSQCSERWRNVL 446
                       8******************************.************986 PP
4Myb_DNA-binding33.97.1e-11453496246
                       SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       g W +eEd +l+  v++ G+  W++Ia  m  +Rt+++c  rw  
  TRIDC5BG047650.5 453 GEWRPEEDSKLLASVHEVGPC-WSKIAGAMIPHRTDNMCLRRWKR 496
                       79*****************88.*****99999***********86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 826 aa     Download sequence    
PRPICAWPPS DAEDDEEDDL ETLRAIQRRF SHYHSGTSTG PLENMKNEAS KGGNDEFIAH  60
RPGEEDAQKK NMNANTQTGF PKAALLLVDA LKKNRACQKF IRRKMINIEA KIEVNKDLRD  120
RVKCLMDYQY SCRRSFGKVL CQKVDPRVRL ISSQKQSAQS AKNKYKMPAL LLGPAENPHV  180
EKYKAVLKQF PVSLQKHPWS DIEKDRLAKG IKQQYQEALI KDSMKNGSSS GDFSAVDMAY  240
ALTNTVGNFE ATPEILRSVL PLVNWDFIAA MYLPGRSGAE CESRWLNHDD PLINHNAWTA  300
CEEKRLILTV QEKGMHNWIN IAVALGTQRT PFQCLARYQR SLNPHILKRT WTKEEDLQLL  360
AAVQTYGCNW QLVSANLVGR IGNQCSNRYR KTLIPERKRV GRWSEDEDKR LMVSVKLFRS  420
GSWNKIAQFV PGRTQSQCSE RWRNVLDPDI EHGEWRPEED SKLLASVHEV GPCWSKIAGA  480
MIPHRTDNMC LRRWKRLCQD ELPLMIAANQ VKKSIFQTNF VDRETERPAI CPSDFPSLVY  540
SKVDKGDENT VSDQVKKPRK RSRKSSVDNV PPNDPSKSSA DAAAVNTTKR KSRKKLSGIG  600
AENQTGEDIT VSDGVNNSSR GHSRARKRKV TTDGDVVVQT RMRGSISVDN ELTLDILGGP  660
ISFDDEAPTN QKRDPTSVGK EGTAKKRTRG SVSVGNEGPV KKKMRGSISV GDGRAVKNRM  720
RGSVSIDNQG NTTKRKRVSR KSAKGNSKTD GEVNTCEMDL PSVPSEAAAE RGIDTGNTNK  780
MKRKSTPRPK LINMAEGTVD EYSRLADCIS FARGNGTSKN NRWALR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1556564KKPRKRSRK
2684690AKKRTRG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18100.11e-143MYB family protein