PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG047650.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 859aa    MW: 95848.4 Da    PI: 10.0579
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG047650.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.37.3e-08290334246
                       SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       ++WT+ E+++l+  v++ G+++W  Ia  +g+ Rt+ qc  r+q 
  TRIDC5BG047650.1 290 NAWTACEEKRLILTVQEKGMHNWINIAVALGTQRTPFQCLARYQR 334
                       68*****************************99**********96 PP
2Myb_DNA-binding43.19.5e-14343387248
                       SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                         WT+eEd++l+ av+ +G + W ++++ +  gR ++qc +r++k l
  TRIDC5BG047650.1 343 RTWTKEEDLQLLAAVQTYGCN-WQLVSANLV-GRIGNQCSNRYRKTL 387
                       68*****************88.*********.************975 PP
3Myb_DNA-binding43.85.8e-14395440248
                       SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                       grW+++Ed++l   vk++ +g+W++Ia+ ++ gRt  qc +rw+++l
  TRIDC5BG047650.1 395 GRWSEDEDKRLMVSVKLFRSGSWNKIAQFVP-GRTQSQCSERWRNVL 440
                       8******************************.************986 PP
4Myb_DNA-binding33.97.5e-11447490246
                       SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       g W +eEd +l+  v++ G+  W++Ia  m  +Rt+++c  rw  
  TRIDC5BG047650.1 447 GEWRPEEDSKLLASVHEVGPC-WSKIAGAMIPHRTDNMCLRRWKR 490
                       79*****************88.*****99999***********86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 859 aa     Download sequence    
WPPSDAEDDE EDDLETLRAI QRRFSHYHSG TSTGPLENMK NEASKGGNDE FIAHRPGEED  60
AQKKNMNANT QTGFPKAALL LVDALKKNRA CQKFIRRKMI NIEAKIEVNK DLRDRVKCLM  120
DYQYSCRRSF GKVLCQKVDP RVRLISSQKQ SAQSAKNKYK MPALLLGPAE NPHVEKYKAV  180
LKQFPVSLQK HPWSDIEKDR LAKGIKQQYQ EALIKDSMKN GSSSGDFSAV DMAYALTNTV  240
GNFEATPEIL RSVLPLVNWD FIAAMYLPGR SGAECESRWL NHDDPLINHN AWTACEEKRL  300
ILTVQEKGMH NWINIAVALG TQRTPFQCLA RYQRSLNPHI LKRTWTKEED LQLLAAVQTY  360
GCNWQLVSAN LVGRIGNQCS NRYRKTLIPE RKRVGRWSED EDKRLMVSVK LFRSGSWNKI  420
AQFVPGRTQS QCSERWRNVL DPDIEHGEWR PEEDSKLLAS VHEVGPCWSK IAGAMIPHRT  480
DNMCLRRWKR LCQDELPLMI AANQVKKSIF QTNFVDRETE RPAICPSDFP SLVYSKVDKG  540
DENTVSDQVK KPRKRSRKSS VDNVPPNDPS KSSADAAAVN TTKRKSRKKL SGIGAENQTG  600
EDITVSDGVN NSSRGHSRAR KRKVTTDGDV VVQTRMRGSI SVDNELTLDI LGGPISFDDE  660
APTNQKRDPT SVGKEGTAKK RTRGSVSVGN EGPVKKKMRG SISVGDGRAV KNRMRGSVSI  720
DNQGNTTKRK RVSRKSAKGN SKTDGEVNTC EMDLPSVPSE AAAERGIDTG NTNKMKRKST  780
PRPKLINMAE GTVDEYSRLA DCISFARGNG TSKNNSVMPI NNAMQSGGPS GENPQVAISA  840
RLDPTSIENG SSPNTQVVD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1550558KKPRKRSRK
2678684AKKRTRG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18100.11e-143MYB family protein