PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5BG047620.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | NAC | ||||||||
Protein Properties | Length: 166aa MW: 18118.1 Da PI: 10.827 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 60.1 | 7.3e-19 | 11 | 81 | 54 | 128 |
NAM 54 eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk....kgelvglkktLvfykgrapkgektdWvmheyrl 128 e ++ yfFs+r+ +g r++rat gyWkatgk+k+v+++ k+ lvg+k+ L+f++g++ +tdWvmheyrl TRIDC5BG047620.3 11 EGESAYFFSQRQG---RGGRRRRATG-GYWKATGKEKPVFVQlpvgKRLLVGVKTALAFHRGKS----RTDWVMHEYRL 81 55678****9876...5889999977.**************999977778**********6544....79*******98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 166 aa Download sequence |
RPLGPPRGAS EGESAYFFSQ RQGRGGRRRR ATGGYWKATG KEKPVFVQLP VGKRLLVGVK 60 TALAFHRGKS RTDWVMHEYR LAGAADQNKR ANGGSQSSEW VVCRVSMKSR ARRSAAGGET 120 TGDHQQEQPS PSPSSTSSCV TDHTCHAPDQ EEVSSSTSHC QQHPTR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G04070.2 | 1e-18 | NAC family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5BG047620.3 |