PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5BG046850.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | SBP | ||||||||
Protein Properties | Length: 433aa MW: 45255.5 Da PI: 7.2937 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 129.6 | 1.1e-40 | 120 | 196 | 2 | 78 |
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 C v+gC+adls++++yhrrhkvCe+hsk+p v+v+g+e rfCqqCsrfh l efDe+krsCr+rL++hn+rrrk+q TRIDC5BG046850.3 120 CAVDGCKADLSKCRDYHRRHKVCEAHSKTPLVVVAGREMRFCQQCSRFHLLAEFDEAKRSCRKRLDGHNRRRRKPQV 196 **************************************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 433 aa Download sequence |
MDWDLKMPGS WDLAELEHDG VPAMAAPAAA GIAAAAARGP PGRPECSVDL KLGGLGEFGP 60 AADGAMKQPP VATAAAAANG PAASLSASAS NAAAVVPSAS PLKRPRPGAG GAGAGHCPSC 120 AVDGCKADLS KCRDYHRRHK VCEAHSKTPL VVVAGREMRF CQQCSRFHLL AEFDEAKRSC 180 RKRLDGHNRR RRKPQVDSMN SGSFMTTQQG LYSNSGTRFA SFSAPRPEPS WSGIIKSEDS 240 NPYYTTTHQI NFAGSSSSYS KEGRRFPFLH EGDQMSFSTG APALEIPPVC QPLLKAVAPP 300 PPPPPESSSS NKMFSDGQLT HVLDSDCALS LLSSPANSSS VDVSRMVRPS EHIPSVPNLQ 360 QFGSSSWFAC SQASSAATGF AAFPGGMDGE QLNAGGALVP SSNDNEMNCH GIFHVGADGS 420 SEGTSPSLPF SWQ |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 103 | 107 | KRPRP |
2 | 177 | 194 | KRSCRKRLDGHNRRRRKP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G50670.1 | 3e-39 | SBP family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5BG046850.3 |