PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5BG045910.6 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | bHLH | ||||||||
Protein Properties | Length: 260aa MW: 28122 Da PI: 8.36 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 26.5 | 1.2e-08 | 113 | 160 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i ++ L++l+P + +k Ka +L + ++Y++sLq TRIDC5BG045910.6 113 SHSLAERVRREKITLKMKMLQDLVPGC----NKVIGKALMLDEIINYVQSLQ 160 8*************************9....677*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 260 aa Download sequence |
PAWAHGANAR KRKAPAAGAG KGKEAASCFA KFGLQMGEPT GPDSKKCKIE DETVRPKVEE 60 EAATATASDG SAGGERGRKQ AKGKGSKSKQ PAADEPPRDY VHVRARRGQA TDSHSLAERV 120 RREKITLKMK MLQDLVPGCN KVIGKALMLD EIINYVQSLQ QQVEFLSMKL STVNPQLDFD 180 TLSNLLHKDM NQALGPSAST VFPLESAGTV YPLCDQADLY QSFSSGAMEN QCSMGLLDMA 240 LPPAPQYPFQ KQVIVDCLEN |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 10 | 48 | RKRKAPAAGAGKGKEAASCFAKFGLQMGEPTGPDSKKCK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68920.1 | 2e-49 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5BG045910.6 |