PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5BG045840.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB_related | ||||||||
Protein Properties | Length: 89aa MW: 9979.07 Da PI: 9.4126 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 28.1 | 4.8e-09 | 16 | 60 | 3 | 44 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44 W++ E +l+ +a + +G g +W +++r mg ++t+ +++ ++ TRIDC5BG045840.2 16 EWSKKENKLFEEALAYYGEGtpdRWLKVSRAMGGTKTADEVRRYY 60 7******************************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 89 aa Download sequence |
MSSGSRSASR GGANPEWSKK ENKLFEEALA YYGEGTPDRW LKVSRAMGGT KTADEVRRYY 60 EILDSDIKLI DSGRVPFPKY NTQGQGAWN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G39250.1 | 4e-23 | MYB_related family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5BG045840.2 |