PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG043980.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

SBP

Protein Properties

Length: 393aa MW: 41148.1 Da PI: 8.5139

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG043980.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	134.2	4.3e-42	73	148	1	76
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkk 76 +CqvegC +dls k+y+ rhkvC hskap v+v+g+eqrfCqqCsrfh+l efD++krsCrrrLa+hnerrrk+ TRIDC5BG043980.1 73 RCQVEGCGVDLSGGKTYYCRHKVCLEHSKAPLVVVAGIEQRFCQQCSRFHQLPEFDQGKRSCRRRLAGHNERRRKP 148 6*************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 393 aa Download sequence
GGSGGGDGGG RRPGDDLHGL NFGQKIYFEQ EVAGSSSSGG RKGKGPAPAR AGGGGGGSGA 60 STPVAGGNAS QPRCQVEGCG VDLSGGKTYY CRHKVCLEHS KAPLVVVAGI EQRFCQQCSR 120 FHQLPEFDQG KRSCRRRLAG HNERRRKPPP GPMSTRYGRL AASFNEDPGR LRSFLLDFSY 180 PTAPAGVRDP WPAVQPGDHR MPGTTHWQGS HHEHHPHRSA VAGYGDHHAY NGQGSSSGGG 240 GAPMIPGGFE LPSDECMAGV AADSSCALSL LSTQPWDSSA HSSSHNRSPA MSTTSAFQGS 300 PVAPSVMASN YMAASSSGSW GSPRGARSMQ HHHHHMQHDT VMSEVHPSSV HHGQFGELEL 360 ALQQGRASPN PPHAEHGSGG AFSHSSNAMN WSL

Sequence ? help Back to Top

Protein Sequence Length: 393 aa Download sequence

GGSGGGDGGG RRPGDDLHGL NFGQKIYFEQ EVAGSSSSGG RKGKGPAPAR AGGGGGGSGA  60
STPVAGGNAS QPRCQVEGCG VDLSGGKTYY CRHKVCLEHS KAPLVVVAGI EQRFCQQCSR  120
FHQLPEFDQG KRSCRRRLAG HNERRRKPPP GPMSTRYGRL AASFNEDPGR LRSFLLDFSY  180
PTAPAGVRDP WPAVQPGDHR MPGTTHWQGS HHEHHPHRSA VAGYGDHHAY NGQGSSSGGG  240
GAPMIPGGFE LPSDECMAGV AADSSCALSL LSTQPWDSSA HSSSHNRSPA MSTTSAFQGS  300
PVAPSVMASN YMAASSSGSW GSPRGARSMQ HHHHHMQHDT VMSEVHPSSV HHGQFGELEL  360
ALQQGRASPN PPHAEHGSGG AFSHSSNAMN WSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42200.1	3e-44	SBP family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG043980.1