PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG043800.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 337aa MW: 38386.2 Da PI: 12.6554

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG043800.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.2	1.2e-12	270	315	6	55
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++Er RR +i +++ +L+el+P+ k + +++L +Av+YIk+Lq TRIDC5BG043800.4 270 SIAERVRRTKISERIRKLQELVPNM----EKQTNTSDMLDLAVDYIKELQ 315 689*******************6....4679**************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 337 aa Download sequence
VRGLPPGLRG RWRGAPPGQP GPRRRHRLRP PPLRPPHPAP ARDEGQASPP RRQPLRRERR 60 RLHGLAAAAA HVPAAAADGR HGGAVPHGKL RRHGPRRRRR RQRQPAPAEQ LPRRVPQPSE 120 HGQRLREHAQ GGHGRRRWRG RIQERRHAAQ GAAELLVAAG VGDVADLGDG ERGTGRWRQR 180 RRRGRQQRSR LRRHPRVPGG RPLGRRRLGR RRPRDGPANG AARQLKPQFS LPVGSKPSPE 240 IAAIEKFLQF QDSVPCKIRA KRGCATHPRS IAERVRRTKI SERIRKLQEL VPNMEKQTNT 300 SDMLDLAVDY IKELQMQTRI MRPFASLFVR VEARRRC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	92	101	RHGPRRRRRR
2	96	101	RRRRRR
3	96	103	RRRRRRQR
4	178	185	RQRRRRGR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42280.1	7e-45	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG043800.4