PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG043800.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 406aa MW: 43033.3 Da PI: 9.5412

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG043800.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38.9	1.6e-12	339	384	6	55
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++Er RR +i +++ +L+el+P+ k + +++L +Av+YIk+Lq TRIDC5BG043800.2 339 SIAERVRRTKISERIRKLQELVPNM----EKQTNTSDMLDLAVDYIKELQ 384 689*******************6....4679**************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 406 aa Download sequence
MYGAPLSKDL NLPVQHQPAA NGVRTPPQMS SPGLLRYRSA PSAMFGDVCG DFLPASAGAG 60 VGHRQGSPDH AADTGFARLL SGHHTQHQPE MRDKPPRPAA SHFAENAAAS MASQQQQLMY 120 QPQQQMAAME GLFRTASSGA TDPVAAGGGN DSLLRQSSSP AGFLNHLNMD NGYGSMLRAG 180 MGGAAGGGGY RNGDTRLKGQ LSFSSRQGSV MSQISEMVSE ELGDGDSGDD EAGSNGAGYG 240 GIPGYPVVAP SAGAGWDEPS PSPSPSLLTS DGLPGPAAKR RPRDGPANGA ARQLKPQFSL 300 PVGSKPSPEI AAIEKFLQFQ DSVPCKIRAK RGCATHPRSI AERVRRTKIS ERIRKLQELV 360 PNMEKQTNTS DMLDLAVDYI KELQMQTRIM RPFASLFVRV EARRRC

Sequence ? help Back to Top

Protein Sequence Length: 406 aa Download sequence

MYGAPLSKDL NLPVQHQPAA NGVRTPPQMS SPGLLRYRSA PSAMFGDVCG DFLPASAGAG  60
VGHRQGSPDH AADTGFARLL SGHHTQHQPE MRDKPPRPAA SHFAENAAAS MASQQQQLMY  120
QPQQQMAAME GLFRTASSGA TDPVAAGGGN DSLLRQSSSP AGFLNHLNMD NGYGSMLRAG  180
MGGAAGGGGY RNGDTRLKGQ LSFSSRQGSV MSQISEMVSE ELGDGDSGDD EAGSNGAGYG  240
GIPGYPVVAP SAGAGWDEPS PSPSPSLLTS DGLPGPAAKR RPRDGPANGA ARQLKPQFSL  300
PVGSKPSPEI AAIEKFLQFQ DSVPCKIRAK RGCATHPRSI AERVRRTKIS ERIRKLQELV  360
PNMEKQTNTS DMLDLAVDYI KELQMQTRIM RPFASLFVRV EARRRC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42280.1	7e-45	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG043800.2