PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5BG042760.4 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | WRKY | ||||||||
Protein Properties | Length: 455aa MW: 49648.2 Da PI: 4.8643 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 103.7 | 9.8e-33 | 278 | 334 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +DgynWrKYGqK+vk+se+prsYY+Ct+++Cpvkkkvers+ d++++ei+Y+++Hnh+ TRIDC5BG042760.4 278 EDGYNWRKYGQKQVKSSEHPRSYYKCTHPDCPVKKKVERSQ-DGQITEIVYKSSHNHP 334 8****************************************.***************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 455 aa Download sequence |
MAGTSDRGSL MEDWMAMPPT PSPRTLMSSF LNEDFSSGQF SNFFGEHVSN KPHDQSEKRG 60 ELVDLREQVP AQSATDTATP QKDFSLQPNS FNANQKSNPQ GSLAERRASR AGFSIPKIDT 120 SRVGSSTVIR SPIAIPPGLS PTTLLESPVF LYNAMAQPSP TTGKLFVASE ANSTMPPDST 180 FSNDVFSFQP HSGPTSYSNV EKGYNVCHQN QSLSNIHQQG SSLQSSFTAA KDSADETIVK 240 PKTSDSVFSD NHSSEEQEDD EGDQNEEYSS ATNSNPAEDG YNWRKYGQKQ VKSSEHPRSY 300 YKCTHPDCPV KKKVERSQDG QITEIVYKSS HNHPLPPPNR RSGIPSLQIN DPQVHLLEKP 360 GLHTGVNTAS LWENGKSECI QDMQGVEGRP AAGPPVSAYG DTSIMESQDA ADVSSTLSNE 420 IDRATQGTIS LDCDVGEDET ESKRRLVSPL HFTQP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G56270.1 | 1e-59 | WRKY family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5BG042760.4 |