PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG042760.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

WRKY

Protein Properties

Length: 297aa MW: 31767.4 Da PI: 7.0699

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG042760.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	105.7	2.4e-33	108	166	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct++gC+v+k+ver+++d k v++tYeg+Hnhe TRIDC5BG042760.3 108 LDDGYRWRKYGQKVVKGNPNPRSYYKCTHQGCSVRKHVERASHDLKSVITTYEGKHNHE 166 59********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 297 aa Download sequence
MQGVEGRPAA GPPVSAYGDT SIMESQDAAD VSSTLSNEID RATQGTISLD CDVGEDETES 60 KRRKLDALAA VTIPTATTTS SIDMVAAASR AVREPRVVVQ TTSEVDILDD GYRWRKYGQK 120 VVKGNPNPRS YYKCTHQGCS VRKHVERASH DLKSVITTYE GKHNHEVPAA RNSGNAGSAP 180 ASAPQANLSH HRQEQAQGSY SQFGGASPFG SFGLPPRGHL GAAGNFHFGM APPGMSMPPM 240 PAARHPSMMQ GYPGLMMQEG QMMQEGQMKA EPDQQSGFPA SSAYQQMMGR PPFGPQM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56270.1	3e-54	WRKY family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG042760.3