PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG041450.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

C2H2

Protein Properties

Length: 980aa MW: 106662 Da PI: 4.5146

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG041450.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.5	0.00011	327	349	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +C++C+ +F ++s +++H+ + H TRIDC5BG041450.1 327 ECKKCNLTFEDQSAYVQHQLSfH 349 5******************9988 PP

Sequence ? help Back to Top
Protein Sequence Length: 980 aa Download sequence
DRAVFNESAG SRKQTFSRRR AATNLPHNLT PSTASSSAVA APTEEDSENR LIVFHLQQLF 60 ARDDPSYLPP PPPIPLQQLP PIPIPAPTIP VPTPPVASVP IQQLPDPDRD LTNPKGVAVD 120 LARLAELVDP YGEEIRNRTA GLALESELLG FMNELEGQWG SRRRRRKFVE AAIFGDHLPR 180 RWKLILGIKR KERAAWINCR RYVSPRGHQF ATCREVSSYF MSLLGYVEAK PTTVQNNDMG 240 VRDLSAVNVG VRDLSAVNVG VQNNDVGVRD LSAVNTAGLH QQNDSTRDMQ SAVSATSVTL 300 SIHNGDSQGQ RQKPYKDEAP IEAVRKECKK CNLTFEDQSA YVQHQLSFHQ RKAKRRKVDK 360 SIGLGVSKDG KLETQESQRT SEDKPGYFGH GVADVKSQGQ SPAELFGGAS SGDVGAQLSL 420 AAAPCGLQEI TALPEQVEEP SAGEPVSGHQ DLPQETTGLP QQEKELSATE PFAGHQKEHV 480 DNSGDHEIHD GACHIAEEPL AFDVGSNLST CKSPEPEVHE HDSSKDLEFS IADCSGSFDR 540 SHEISKIPQD VPCTADAPGE KSCSDDPMDC ADITLPKQVP EHCDMLDHKF RGFPGGTGFN 600 DQVGNNPLSA NLDEPDLSSN SMEVDNSKIA CKFGDMLNST SSEYDKPVVD QIDRGVTALK 660 NDAINIDDGM NIDVRIKEVN LNSCLDTISS PVSGANCETS NALHDGNRSS ILAQCFGGSS 720 NDDNVCQDES FVNQNNVSKA EIFVNQSNDM VYQSNLNMNP ISPPQISVDY FTNCSMNSEI 780 KNNDNRRDDN AKEQFVNSRN ISSNEPGFDA EAYNNDIFTG AMAETSFAQL NNAMNMKTDY 840 SSCYSISDLN TLTGGTATDG IDFHGMRSSF VSGSTSRSEP NELDFDIKGS MLEALERSDS 900 DLETQYNGGD PAIDSLPAAG TSGTSVDDFM SMHTNFGSLT SLVRSVEGGP MSRLIQDQCD 960 LQLGFGAQKQ QIYPSFEEHL

Sequence ? help Back to Top

Protein Sequence Length: 980 aa Download sequence

DRAVFNESAG SRKQTFSRRR AATNLPHNLT PSTASSSAVA APTEEDSENR LIVFHLQQLF  60
ARDDPSYLPP PPPIPLQQLP PIPIPAPTIP VPTPPVASVP IQQLPDPDRD LTNPKGVAVD  120
LARLAELVDP YGEEIRNRTA GLALESELLG FMNELEGQWG SRRRRRKFVE AAIFGDHLPR  180
RWKLILGIKR KERAAWINCR RYVSPRGHQF ATCREVSSYF MSLLGYVEAK PTTVQNNDMG  240
VRDLSAVNVG VRDLSAVNVG VQNNDVGVRD LSAVNTAGLH QQNDSTRDMQ SAVSATSVTL  300
SIHNGDSQGQ RQKPYKDEAP IEAVRKECKK CNLTFEDQSA YVQHQLSFHQ RKAKRRKVDK  360
SIGLGVSKDG KLETQESQRT SEDKPGYFGH GVADVKSQGQ SPAELFGGAS SGDVGAQLSL  420
AAAPCGLQEI TALPEQVEEP SAGEPVSGHQ DLPQETTGLP QQEKELSATE PFAGHQKEHV  480
DNSGDHEIHD GACHIAEEPL AFDVGSNLST CKSPEPEVHE HDSSKDLEFS IADCSGSFDR  540
SHEISKIPQD VPCTADAPGE KSCSDDPMDC ADITLPKQVP EHCDMLDHKF RGFPGGTGFN  600
DQVGNNPLSA NLDEPDLSSN SMEVDNSKIA CKFGDMLNST SSEYDKPVVD QIDRGVTALK  660
NDAINIDDGM NIDVRIKEVN LNSCLDTISS PVSGANCETS NALHDGNRSS ILAQCFGGSS  720
NDDNVCQDES FVNQNNVSKA EIFVNQSNDM VYQSNLNMNP ISPPQISVDY FTNCSMNSEI  780
KNNDNRRDDN AKEQFVNSRN ISSNEPGFDA EAYNNDIFTG AMAETSFAQL NNAMNMKTDY  840
SSCYSISDLN TLTGGTATDG IDFHGMRSSF VSGSTSRSEP NELDFDIKGS MLEALERSDS  900
DLETQYNGGD PAIDSLPAAG TSGTSVDDFM SMHTNFGSLT SLVRSVEGGP MSRLIQDQCD  960
LQLGFGAQKQ QIYPSFEEHL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	162	191	RRRRRKFVEAAIFGDHLPRRWKLILGIKRK
2	163	192	RRRRRKFVEAAIFGDHLPRRWKLILGIKRK
3	164	193	RRRRRKFVEAAIFGDHLPRRWKLILGIKRK
4	350	357	QRKAKRRK

Link Out ? help Back to Top
Ensembl	TRIDC5BG041450.1