PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG041090.8

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HD-ZIP

Protein Properties

Length: 253aa MW: 27329.2 Da PI: 4.3378

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG041090.8	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	60.4	2.9e-19	36	89	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k++++++eq+++Le+ Fe ++++ e++++LA+ lgL+ rqV vWFqNrRa++k TRIDC5BG041090.8 36 KKRRLSAEQVRALERSFEVENKLEPERKARLARDLGLQPRQVAVWFQNRRARWK 89 45689************************************************9 PP
2	HD-ZIP_I/II	134	5.3e-43	35	127	1	93
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 ekkrrls+eqv++LE+sFe e+kLeperK++lar+LglqprqvavWFqnrRAR+ktkqlE+dy+aL+++ydal+ ++++L++++e+L +e+k+ TRIDC5BG041090.8 35 EKKRRLSAEQVRALERSFEVENKLEPERKARLARDLGLQPRQVAVWFQNRRARWKTKQLERDYNALRHSYDALRVDHDALRRDKEALLAEIKD 127 69**************************************************************************************99986 PP

Sequence ? help Back to Top
Protein Sequence Length: 253 aa Download sequence
MVNYMDYGVV GMEADGDAEE EMMACGGGGG CGGGEKKRRL SAEQVRALER SFEVENKLEP 60 ERKARLARDL GLQPRQVAVW FQNRRARWKT KQLERDYNAL RHSYDALRVD HDALRRDKEA 120 LLAEIKDLKG KLGDEEAAAS FTSVKEEPAA SDGPPPAGMG SSDSDSSGVL NDTDATGATP 180 TEEAPAPEMG TLLGGPGAAG AAAAGHGQMF LHGNFLKVEE DETGFLDDEE PCGGFFADEP 240 PLAWWTEPTD PWK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	61	67	ERKARLA
2	84	92	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G65310.2	2e-43	HD-ZIP family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG041090.8