PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5BG041090.7 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 267aa MW: 28638.6 Da PI: 4.4653 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 60.2 | 3.2e-19 | 50 | 103 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k++++++eq+++Le+ Fe ++++ e++++LA+ lgL+ rqV vWFqNrRa++k TRIDC5BG041090.7 50 KKRRLSAEQVRALERSFEVENKLEPERKARLARDLGLQPRQVAVWFQNRRARWK 103 45689************************************************9 PP | |||||||
2 | HD-ZIP_I/II | 133.8 | 6e-43 | 49 | 141 | 1 | 93 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 ekkrrls+eqv++LE+sFe e+kLeperK++lar+LglqprqvavWFqnrRAR+ktkqlE+dy+aL+++ydal+ ++++L++++e+L +e+k+ TRIDC5BG041090.7 49 EKKRRLSAEQVRALERSFEVENKLEPERKARLARDLGLQPRQVAVWFQNRRARWKTKQLERDYNALRHSYDALRVDHDALRRDKEALLAEIKD 141 69**************************************************************************************99986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 267 aa Download sequence |
MKRPGGGNPS SLHQMASPND YGVVGMEADG DAEEEMMACG GGGGCGGGEK KRRLSAEQVR 60 ALERSFEVEN KLEPERKARL ARDLGLQPRQ VAVWFQNRRA RWKTKQLERD YNALRHSYDA 120 LRVDHDALRR DKEALLAEIK DLKGKLGDEE AAASFTSVKE EPAASDGPPP AGMGSSDSDS 180 SGVLNDTDAT GATPTEEAPA PEMGTLLGGP GAAGAAAAGH GQMFLHGNFL KVEEDETGFL 240 DDEEPCGGFF ADEPPLAWWT EPTDPWK |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 75 | 81 | ERKARLA |
2 | 98 | 106 | RRARWKTKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G65310.2 | 3e-43 | HD-ZIP family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5BG041090.7 |