PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG040690.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ZF-HD
Protein Properties Length: 281aa    MW: 29772.4 Da    PI: 10.0331
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG040690.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer100.71e-3153105457
       ZF-HD_dimer   4 vrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrev 57 
                       +rY+eClkNhA+s+GghavDGCgEf+++ geeg+++al+CaAC+CHRnFHRre+
  TRIDC5BG040690.1  53 ARYRECLKNHAVSIGGHAVDGCGEFIAA-GEEGSIDALRCAACNCHRNFHRRES 105
                       79*************************9.999********************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    
GLRRPRRRRR GDADVHAHAG ELQLRASAEP RGQYGGSGGG ELGGRAKAPG GGARYRECLK  60
NHAVSIGGHA VDGCGEFIAA GEEGSIDALR CAACNCHRNF HRRESDFPAG GEGSPFSPTA  120
MVPYGGVPHH QFSPYYRTPA GYLHHHQHHM AAAAAAAAAA AGHPRPLALP STSHSGRDDA  180
DELSGMAAGP MSALAPLSSM SLGAGPSGYG SGSGSGKKRF RTKFTQEQKD KMLAFAERVG  240
WRIQKHDEAA VLQFCDEVGV KRHVLKVWMH NNKHTLGKKP P
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
138RRPRRR
2310RRPRRRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G02540.19e-59ZF-HD family protein