PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC5BG040590.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 192aa MW: 22208.8 Da PI: 10.2442 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 150.5 | 7.8e-47 | 17 | 143 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lp GfrFhPt+ee+++ y +kv + ++ + +i e+d++k +P +Lpkk+k +ekewyf++++d+ky g r+nratk+gyW+atgkdke++ TRIDC5BG040590.1 17 LPSGFRFHPTEEEIITSYPVPKVLNPTFIA-IAIGEIDLNKNKPYELPKKAKMGEKEWYFYCQKDRKYLMGIRTNRATKAGYWEATGKDKEIF 108 699**********************99777.78***************99999**************************************** PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 + + +l+g+kktLvfykgrap+gekt+Wvmhe rl TRIDC5BG040590.1 109 HPTPTLIGMKKTLVFYKGRAPRGEKTNWVMHECRL 143 ********************************987 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 192 aa Download sequence |
MKDHLQVQQQ HQHQLELPSG FRFHPTEEEI ITSYPVPKVL NPTFIAIAIG EIDLNKNKPY 60 ELPKKAKMGE KEWYFYCQKD RKYLMGIRTN RATKAGYWEA TGKDKEIFHP TPTLIGMKKT 120 LVFYKGRAPR GEKTNWVMHE CRLEISKQPA SGPSTAIPKA AAINASFKVF KPRVAVHMNH 180 KHAYMYLATC HR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G29035.1 | 3e-65 | NAC family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC5BG040590.1 |