PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG039120.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GeBP
Protein Properties Length: 267aa    MW: 29637.3 Da    PI: 10.022
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG039120.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF573963.8e-3015112297
            DUF573   2 lfqrlwseeDeivlLqGlidfkaktgk..spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifels 92 
                       +++rlws  De+++L+Gl +++ak g+   +++di ++++ ++ ++s++vs++ql++K+rrLK+K++   ++ak+g+e++++++hd++i+e++
  TRIDC5BG039120.2  15 RPSRLWSHGDELLILRGLATYRAKSGVlpGSTNDIGKLHSHIRAQLSVRVSTTQLSDKVRRLKQKYQLLATRAKNGREQELHTPHDRSIYEHA 107
                       679************************877888************************************************************ PP

            DUF573  93 kkiWg 97 
                       kk+Wg
  TRIDC5BG039120.2 108 KKVWG 112
                       ****8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    
RSAAISAPSP DPLKRPSRLW SHGDELLILR GLATYRAKSG VLPGSTNDIG KLHSHIRAQL  60
SVRVSTTQLS DKVRRLKQKY QLLATRAKNG REQELHTPHD RSIYEHAKKV WGLVGSGGGD  120
GGGSGYENYG GGDSDELQYS GDSDDDMESQ RDDRYHIKNR KVRPITAANG NGIGLGAVNA  180
NGRGKSGLEK GKDAYPYLWE TVEELSKEHP SGAAFKKAFE VLEGSKVRAI EEKLRRFRLM  240
EIRQQLRRMD LMKETVRMVL DALESAD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G11510.13e-15GeBP family protein