PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG039120.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

GeBP

Protein Properties

Length: 449aa MW: 47929.9 Da PI: 9.461

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG039120.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	94.6	1e-29	197	294	2	97
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgk..spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifels 92 +++rlws De+++L+Gl +++ak g+ +++di ++++ ++ ++s++vs++ql++K+rrLK+K++ ++ak+g+e++++++hd++i+e++ TRIDC5BG039120.1 197 RPSRLWSHGDELLILRGLATYRAKSGVlpGSTNDIGKLHSHIRAQLSVRVSTTQLSDKVRRLKQKYQLLATRAKNGREQELHTPHDRSIYEHA 289 679**********************877888******************************************************** PP DUF573 93 kkiWg 97 kk+Wg TRIDC5BG039120.1 290 KKVWG 294 **8 PP

Sequence ? help Back to Top
Protein Sequence Length: 449 aa Download sequence
MAPKRSAATA WGSPSDASDA EGDAGHRHRD RDDPPSDTDP SKTPPPNPNP KSSAAAPSST 60 PSVAADSAAA GSDSGGTYDS DAEADRRLAP KAAASSPKPG GKPRARSPGI NSDSEDSAAP 120 AASDADLDPA AGADSEDDNV SPLRSARRPR AEASIIKPIS SRPMDSPPRG SASASEPRVK 180 RPRSAAISAP SPDPLKRPSR LWSHGDELLI LRGLATYRAK SGVLPGSTND IGKLHSHIRA 240 QLSVRVSTTQ LSDKVRRLKQ KYQLLATRAK NGREQELHTP HDRSIYEHAK KVWGLVGSGG 300 GDGGGSGYEN YGGGDSDELQ YSGDSDDDME SQRDDRYHIK NRKVRPITAA NGNGIGLGAV 360 NANGRGKSGL EKGKDAYPYL WETVEELSKE HPSGAAFKKA FEVLEGSKVR AIEEKLRRFR 420 LMEIRQQLRR MDLMKETVRM VLDALESAD

Sequence ? help Back to Top

Protein Sequence Length: 449 aa Download sequence

MAPKRSAATA WGSPSDASDA EGDAGHRHRD RDDPPSDTDP SKTPPPNPNP KSSAAAPSST  60
PSVAADSAAA GSDSGGTYDS DAEADRRLAP KAAASSPKPG GKPRARSPGI NSDSEDSAAP  120
AASDADLDPA AGADSEDDNV SPLRSARRPR AEASIIKPIS SRPMDSPPRG SASASEPRVK  180
RPRSAAISAP SPDPLKRPSR LWSHGDELLI LRGLATYRAK SGVLPGSTND IGKLHSHIRA  240
QLSVRVSTTQ LSDKVRRLKQ KYQLLATRAK NGREQELHTP HDRSIYEHAK KVWGLVGSGG  300
GDGGGSGYEN YGGGDSDELQ YSGDSDDDME SQRDDRYHIK NRKVRPITAA NGNGIGLGAV  360
NANGRGKSGL EKGKDAYPYL WETVEELSKE HPSGAAFKKA FEVLEGSKVR AIEEKLRRFR  420
LMEIRQQLRR MDLMKETVRM VLDALESAD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00390.1	1e-15	GeBP family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG039120.1