PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5BG038900.6 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 94aa MW: 10610.2 Da PI: 11.6006 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 59.7 | 4.7e-19 | 12 | 64 | 2 | 54 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRak 54 rk+ +++keq Lee F+++++++ +++ LAk+l+L rqV vWFqNrRa+ TRIDC5BG038900.6 12 RKKLRLSKEQAAFLEESFKEHSTLNPRQKVALAKQLNLRPRQVEVWFQNRRAR 64 788899**********************************************9 PP | |||||||
2 | HD-ZIP_I/II | 87 | 2.5e-28 | 12 | 65 | 1 | 54 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARt 54 +kk+rlskeq+++LEesF+e+++L+p++Kv+la++L+l+prqv+vWFqnrRAR TRIDC5BG038900.6 12 RKKLRLSKEQAAFLEESFKEHSTLNPRQKVALAKQLNLRPRQVEVWFQNRRARC 65 69***************************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 94 aa Download sequence |
RGSDEDDGGS ARKKLRLSKE QAAFLEESFK EHSTLNPRQK VALAKQLNLR PRQVEVWFQN 60 RRARCGAMKS FSFPSPLSLS SRARILAGQA KPIK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06710.1 | 8e-33 | HD-ZIP family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5BG038900.6 |