PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG038340.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 394aa MW: 44437.9 Da PI: 6.5829

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG038340.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	168.9	1.7e-52	14	141	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 l pGfrFhPtdeelv +yLk+k+++k+l++ e i+++diyk++PwdLpk ++++ekewyf+++rd+ky+++ r+nr+t +g+Wkatg+d++++ TRIDC5BG038340.4 14 LLPGFRFHPTDEELVGFYLKRKIQQKPLSI-ELIRQLDIYKYDPWDLPKLASSGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIY 105 579*************************.89***********8888999************************************ PP NAM 94 sk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 s+ +++ +glkk+Lvfykgra kg ktdW+mhe+rl TRIDC5BG038340.4 106 SSeGTKCIGLKKSLVFYKGRAAKGIKTDWMMHEFRL 141 956667**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 394 aa Download sequence
MDERSDMDKL EEALLPGFRF HPTDEELVGF YLKRKIQQKP LSIELIRQLD IYKYDPWDLP 60 KLASSGEKEW YFYCPRDRKY RNSARPNRVT GAGFWKATGT DRPIYSSEGT KCIGLKKSLV 120 FYKGRAAKGI KTDWMMHEFR LPSLTDPSLP KVPIDKNIPA NDAWAICRIF KKPSSMAQRA 180 LSHSWGPQST ATIEPDLLSA LQSIQASHFA FESSPCSAEV AIPVSRLNSQ HYFHEQQQQK 240 PNSSQNGSSC KVINFSRGPS LTHISDKDIH SGPIIFPFET QTLQRSSDAV LFSIAPGIIN 300 SMNEASPELE FEHPEQCNGY AVDWVIDTNE GIGNRDEDPY TRKPDNGHNT GNEYGVPPKI 360 KFPFDLGVHS SDDWISNVPC ESLNCPPASP RDVQ

Sequence ? help Back to Top

Protein Sequence Length: 394 aa Download sequence

MDERSDMDKL EEALLPGFRF HPTDEELVGF YLKRKIQQKP LSIELIRQLD IYKYDPWDLP  60
KLASSGEKEW YFYCPRDRKY RNSARPNRVT GAGFWKATGT DRPIYSSEGT KCIGLKKSLV  120
FYKGRAAKGI KTDWMMHEFR LPSLTDPSLP KVPIDKNIPA NDAWAICRIF KKPSSMAQRA  180
LSHSWGPQST ATIEPDLLSA LQSIQASHFA FESSPCSAEV AIPVSRLNSQ HYFHEQQQQK  240
PNSSQNGSSC KVINFSRGPS LTHISDKDIH SGPIIFPFET QTLQRSSDAV LFSIAPGIIN  300
SMNEASPELE FEHPEQCNGY AVDWVIDTNE GIGNRDEDPY TRKPDNGHNT GNEYGVPPKI  360
KFPFDLGVHS SDDWISNVPC ESLNCPPASP RDVQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G26870.1	1e-101	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG038340.4