PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC5BG038220.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | ZF-HD | ||||||||
Protein Properties | Length: 318aa MW: 33517.4 Da PI: 7.4386 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 94.1 | 1.2e-29 | 5 | 59 | 4 | 57 |
ZF-HD_dimer 4 vrYkeClkNhAaslGghavDGCgEfmpsegee.gtaaalkCaACgCHRnFHRrev 57 +YkeClkNhAa++G+havDGCgE+mp + + +++a+ kCaACgCHRnFHR + TRIDC5BG038220.2 5 PTYKECLKNHAAAIGAHAVDGCGEWMPVVELNtADPASYKCAACGCHRNFHRLVM 59 58*************************98888799*****************766 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 318 aa Download sequence |
VEAVPTYKEC LKNHAAAIGA HAVDGCGEWM PVVELNTADP ASYKCAACGC HRNFHRLVMV 60 EGSPPPPPPP PPALLPAPPR GHGQETPDDR LPGVDGDDSD SDSDGSEYDD ERSVSPPQHP 120 PPAHLPAPVA QQPPPPYISS APHPHMLLSL NSSAPGAPQG QSRLPAQLSP ATAPPPHGMM 180 PARKRFRTKF TAEQKQRMQE LSERLGWRLQ KRDEGVVDEW CRDIGVSKGV FKVWMHNNKH 240 NYLGGHSARR SASAAASSAA TTPPFNPSVS HSSPAPTATG FNMNGTASSA STATTTATPS 300 PIFAAGHKLN GASSPQSA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G28920.1 | 6e-26 | ZF-HD family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC5BG038220.2 |