PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG038220.2
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ZF-HD
Protein Properties Length: 318aa    MW: 33517.4 Da    PI: 7.4386
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG038220.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer94.11.2e-29559457
       ZF-HD_dimer  4 vrYkeClkNhAaslGghavDGCgEfmpsegee.gtaaalkCaACgCHRnFHRrev 57
                       +YkeClkNhAa++G+havDGCgE+mp  + + +++a+ kCaACgCHRnFHR  +
  TRIDC5BG038220.2  5 PTYKECLKNHAAAIGAHAVDGCGEWMPVVELNtADPASYKCAACGCHRNFHRLVM 59
                      58*************************98888799*****************766 PP

Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    
VEAVPTYKEC LKNHAAAIGA HAVDGCGEWM PVVELNTADP ASYKCAACGC HRNFHRLVMV  60
EGSPPPPPPP PPALLPAPPR GHGQETPDDR LPGVDGDDSD SDSDGSEYDD ERSVSPPQHP  120
PPAHLPAPVA QQPPPPYISS APHPHMLLSL NSSAPGAPQG QSRLPAQLSP ATAPPPHGMM  180
PARKRFRTKF TAEQKQRMQE LSERLGWRLQ KRDEGVVDEW CRDIGVSKGV FKVWMHNNKH  240
NYLGGHSARR SASAAASSAA TTPPFNPSVS HSSPAPTATG FNMNGTASSA STATTTATPS  300
PIFAAGHKLN GASSPQSA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28920.16e-26ZF-HD family protein