PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG038220.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ZF-HD
Protein Properties Length: 390aa    MW: 40909.1 Da    PI: 8.1787
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG038220.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer93.61.7e-293993457
       ZF-HD_dimer  4 vrYkeClkNhAaslGghavDGCgEfmpsegee.gtaaalkCaACgCHRnFHRrev 57
                       +YkeClkNhAa++G+havDGCgE+mp  + + +++a+ kCaACgCHRnFHR  +
  TRIDC5BG038220.1 39 PTYKECLKNHAAAIGAHAVDGCGEWMPVVELNtADPASYKCAACGCHRNFHRLVM 93
                      58*************************98888799*****************766 PP

Sequence ? help Back to Top
Protein Sequence    Length: 390 aa     Download sequence    
MEAMDVKYRP ALYPNGSVKK LRQAAPVPPP PPAAVEAVPT YKECLKNHAA AIGAHAVDGC  60
GEWMPVVELN TADPASYKCA ACGCHRNFHR LVMVEGSPPP PPPPPPALLP APPMPMPMPM  120
PATVLHGLPQ RGHGQETPDD RLPGVDGDDS DSDSDGSEYD DERSVSPPQH PPPAHLPAPV  180
AQQPPPPYIS SAPHPHMLLS LNSSAPGAPQ GQSRLPAQLS PATAPPPHGM MPARKRFRTK  240
FTAEQKQRMQ ELSERLGWRL QKRDEGVVDE WCRDIGVSKG VFKVWMHNNK HNYLGGHSAR  300
RSASAAASSA ATTPTAPAAG GPFRLSPATD APAPAPFNPS VSHSSPAPTA TGFNMNGTAS  360
SASTATTTAT PSPIFAAGHK LNGASSPQSA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28920.12e-25ZF-HD family protein