PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5BG038220.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | ZF-HD | ||||||||
Protein Properties | Length: 390aa MW: 40909.1 Da PI: 8.1787 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 93.6 | 1.7e-29 | 39 | 93 | 4 | 57 |
ZF-HD_dimer 4 vrYkeClkNhAaslGghavDGCgEfmpsegee.gtaaalkCaACgCHRnFHRrev 57 +YkeClkNhAa++G+havDGCgE+mp + + +++a+ kCaACgCHRnFHR + TRIDC5BG038220.1 39 PTYKECLKNHAAAIGAHAVDGCGEWMPVVELNtADPASYKCAACGCHRNFHRLVM 93 58*************************98888799*****************766 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 390 aa Download sequence |
MEAMDVKYRP ALYPNGSVKK LRQAAPVPPP PPAAVEAVPT YKECLKNHAA AIGAHAVDGC 60 GEWMPVVELN TADPASYKCA ACGCHRNFHR LVMVEGSPPP PPPPPPALLP APPMPMPMPM 120 PATVLHGLPQ RGHGQETPDD RLPGVDGDDS DSDSDGSEYD DERSVSPPQH PPPAHLPAPV 180 AQQPPPPYIS SAPHPHMLLS LNSSAPGAPQ GQSRLPAQLS PATAPPPHGM MPARKRFRTK 240 FTAEQKQRMQ ELSERLGWRL QKRDEGVVDE WCRDIGVSKG VFKVWMHNNK HNYLGGHSAR 300 RSASAAASSA ATTPTAPAAG GPFRLSPATD APAPAPFNPS VSHSSPAPTA TGFNMNGTAS 360 SASTATTTAT PSPIFAAGHK LNGASSPQSA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G28920.1 | 2e-25 | ZF-HD family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5BG038220.1 |