PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5BG037960.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | WRKY | ||||||||
Protein Properties | Length: 312aa MW: 33721.1 Da PI: 8.1951 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 95.6 | 3.4e-30 | 153 | 212 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dgy+WrKYGqK+ ++++ pr+Y+rC++a +Cpvkkkv+rsaed +vve tYegeHnh+ TRIDC5BG037960.2 153 VKDGYQWRKYGQKVTRDNPSPRAYFRCAFApSCPVKKKVQRSAEDSSVVEATYEGEHNHP 212 58***************************99****************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 312 aa Download sequence |
MDTARRSPVC LDLMVGLPMV CEPSSARCTG MRAQADIASS ACGRATSMTS SEANKIMEAK 60 FTEVTEENRR LTEMIGYLYP ASTAASPTSP VGKKRSRESM DTSDSGDVNS DKKMGTAEAE 120 HIDVESPLSN GTCRRIKVKR VCTRIDPSDT LVVKDGYQWR KYGQKVTRDN PSPRAYFRCA 180 FAPSCPVKKK VQRSAEDSSV VEATYEGEHN HPRPTRAGEL PSCATQGGGS VPCSISINSS 240 GPTITLDLTK NGGGVQVVEA GEAQPDLKKV CREVASPEFR AALVEQMARE LTGDRKFTDA 300 LAAAILRKLP DY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G80840.1 | 6e-49 | WRKY family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5BG037960.2 |