PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG037960.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WRKY
Protein Properties Length: 263aa    MW: 29029.8 Da    PI: 8.9362
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG037960.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY60.24e-19170209139
                       ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEE CS
              WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkve 39 
                       ++Dgy+WrKYGqK+ ++++ pr+Y+rC++a +Cpvkkkv 
  TRIDC5BG037960.1 170 VKDGYQWRKYGQKVTRDNPSPRAYFRCAFApSCPVKKKVS 209
                       58***************************99*******97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    
MDTARRSPVC LDLMVGLPMV CEPSSARCTG MRAQADIASS ACGRATSMTS SEANKIMEAK  60
FTEVTEENRR LTEMIGYLYA NSQNFARQSP EGEGEQPAST AASPTSPVGK KRSRESMDTS  120
DSGDVNSDKK MGTAEAEHID VESPLSNGTC RRIKVKRVCT RIDPSDTLVV KDGYQWRKYG  180
QKVTRDNPSP RAYFRCAFAP SCPVKKKVSY KLRPVRRALC STNFGLKSFY SVTNFLVRSM  240
VVQVQRSAED SSVVEATYEG EHN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80840.14e-31WRKY family protein