PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG036890.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 219aa    MW: 24173.5 Da    PI: 10.5545
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG036890.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding46.39.7e-151462148
                      TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48
                      +g+W +eEd  l  +v+++G+  +W + +r++g++R++k+c++rw++yl
  TRIDC5BG036890.2 14 KGPWAAEEDAVLRAYVAEHGTAgNWIALPRKIGLNRCGKSCRLRWLNYL 62
                      79******************99*************************97 PP
2Myb_DNA-binding445.1e-1469111246
                       SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       g +T eEd l+  + +  G++ W+tIa+ ++ gRt++++k++w++
  TRIDC5BG036890.2  69 GGFTDEEDRLICSLYASIGSR-WSTIAAQLP-GRTDNDVKNYWNT 111
                       569******************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    
MGRAPCCDKA SVKKGPWAAE EDAVLRAYVA EHGTAGNWIA LPRKIGLNRC GKSCRLRWLN  60
YLRPNIRHGG FTDEEDRLIC SLYASIGSRW STIAAQLPGR TDNDVKNYWN TKLKRRLLGG  120
GRRPIRYAQQ PRLLLMSPTG GAASTALERM QLSVQRRLVG LQDTPGLPFY GNLWPAQQSL  180
LSPAAGYSGF WSHIQTSTYP GRLNVQDHQH AWGSSGGGG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57620.19e-73MYB family protein