PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG036510.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 385aa    MW: 41323.2 Da    PI: 4.8839
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG036510.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.54.4e-20123172255
               AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       +y+G+r+++ +g+W+AeIrdps+     r++lg+++taeeAa+a++a ++k++g
  TRIDC5BG036510.3 123 QYRGIRQRP-WGKWAAEIRDPSK---GVRVWLGTYDTAEEAARAYDAEARKIRG 172
                       69*******.**********965...4*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 385 aa     Download sequence    
MCGGAILAGF IPPSAAAAAA KAAAAKKKQQ QQQRSVTADS LWPGLRKKPA EEEDFEADFR  60
DFERDSNDDD DAVQEVPPPP ATAGFAFAAA AEVALPAPTR LGPDAIQHDG PAAKSVKRVR  120
KNQYRGIRQR PWGKWAAEIR DPSKGVRVWL GTYDTAEEAA RAYDAEARKI RGKKAKVNFP  180
EEAPAVQKST LKPTAAKSAK LAPPPKACED EPFNHLSRGD NDLFAMFAFN DKKVSAKPAE  240
SVDSLLPVKP LVPTETFGMN MLSDQSSNSF GSTDFGWDDE AMTPDYTSVF VPNAAAMPAY  300
GEPAYLQGGA PKRMRNNFGV AVLPQGNGAQ DIPAFDHEMK YSLPYVESSS DGSMDSLLLN  360
GAMQDGASSG DLWSLDELFM AAGGY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53910.34e-29ERF family protein