PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG036510.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 397aa    MW: 42683.8 Da    PI: 4.8202
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG036510.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.54.6e-20135184255
               AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       +y+G+r+++ +g+W+AeIrdps+     r++lg+++taeeAa+a++a ++k++g
  TRIDC5BG036510.2 135 QYRGIRQRP-WGKWAAEIRDPSK---GVRVWLGTYDTAEEAARAYDAEARKIRG 184
                       69*******.**********965...4*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 397 aa     Download sequence    
MCGGAILAGF IPPSAAAAAA KAAAAKKKQQ QQQRSVTADS LWPGLRKKPA EEEDFEADFR  60
DFERDSNDDD DAVQEVPPPP ATAGFAFAAA AEVALPAPTR LGPGIPENNN FIFITDAIQH  120
DGPAAKSVKR VRKNQYRGIR QRPWGKWAAE IRDPSKGVRV WLGTYDTAEE AARAYDAEAR  180
KIRGKKAKVN FPEEAPAVQK STLKPTAAKS AKLAPPPKAC EDEPFNHLSR GDNDLFAMFA  240
FNDKKVSAKP AESVDSLLPV KPLVPTETFG MNMLSDQSSN SFGSTDFGWD DEAMTPDYTS  300
VFVPNAAAMP AYGEPAYLQG GAPKRMRNNF GVAVLPQGNG AQDIPAFDHE MKYSLPYVES  360
SSDGSMDSLL LNGAMQDGAS SGDLWSLDEL FMAAGGY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53910.38e-29ERF family protein