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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | TRIDC5BG034650.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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| Family | G2-like | ||||||||
| Protein Properties | Length: 330aa MW: 32807 Da PI: 7.4688 | ||||||||
| Description | G2-like family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | Myb_DNA-binding | 22.2 | 3.2e-07 | 209 | 242 | 16 | 48 |
HHHTTTT-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
Myb_DNA-binding 16 vkqlGggtWktIartmg.kgRtlkqcksrwqkyl 48
+ +Gg t+k++ + m k +tl ++ks++q+y+
TRIDC5BG034650.1 209 LRSYGGATPKSVLELMDvKDLTLAHVKSHLQMYR 242
5779*9**************************97 PP
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| 2 | G2-like | 50 | 6.7e-16 | 214 | 243 | 26 | 55 |
G2-like 26 kAtPktilelmkvkgLtlehvkSHLQkYRl 55
AtPk++lelm+vk+Ltl+hvkSHLQ+YR+
TRIDC5BG034650.1 214 GATPKSVLELMDVKDLTLAHVKSHLQMYRT 243
49***************************7 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 330 aa Download sequence |
SSAASPDLSL HISLPSTGPP TGPGGGGGGR GPVGGGGGDP WRRLNGSTAS TELSLSPPLL 60 AADQEGAALP WRHRPSSSAA ASSAATTSAQ AALITMPMLQ PLDAGVGGAS AAPPIRGIPI 120 YNGAGGFPFL PPAPGGGEGH HLPKVGFYSY HHPAAWPSSL GSTSPSSLGP GPAPPANSFD 180 PTAAFLSSAA HHRMLSASGR LNGMLSDTLR SYGGATPKSV LELMDVKDLT LAHVKSHLQM 240 YRTVKSTDKP AASAGPTDGG SGDDDFPSAG GQAGSGGDNN MCPRPFPEHR STSEGTASSV 300 GGGGDMDQSS AGNASTKWSN SSRYRTSSSH |
| Nucleic Localization Signal ? help Back to Top | |||
|---|---|---|---|
| No. | Start | End | Sequence |
| 1 | 26 | 36 | GGGGRGPVGGG |
| 2 | 27 | 37 | GGGGRGPVGGG |
| 3 | 28 | 38 | GGGGRGPVGGG |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT1G32240.1 | 2e-19 | G2-like family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | TRIDC5BG034650.1 |
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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