PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC5BG033870.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | FAR1 | ||||||||
Protein Properties | Length: 139aa MW: 16211.5 Da PI: 9.8397 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 40.4 | 9.7e-13 | 6 | 69 | 30 | 90 |
FAR1 30 krtfvCskegkreeekkk...tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +++f+C +g ree++ +k+r++ + t +gC+a++ +++++dg++ev +++ +H+H+l+ TRIDC5BG033870.3 6 WKRFTCAWKGWREEKTVLndhVKKSRKKVKLTSCGCEAMISLRRRDDGNYEVLRFVCQHTHQLV 69 689*********9987666667888889999*******************************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 139 aa Download sequence |
MVIPVWKRFT CAWKGWREEK TVLNDHVKKS RKKVKLTSCG CEAMISLRRR DDGNYEVLRF 60 VCQHTHQLVS TNKKQFTRTN REVSSELRST FLTCHSIDEP LPEKLAYTNW DQERYPEKLV 120 SDRGGNLSPQ SSLLIGQPS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G38180.1 | 2e-08 | FAR1 family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC5BG033870.3 |