PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG033870.28
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 139aa    MW: 16211.5 Da    PI: 9.8397
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG033870.28genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR140.49.7e-136693090
               FAR1 30 krtfvCskegkreeekkk...tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90
                       +++f+C  +g ree++      +k+r++ + t +gC+a++ +++++dg++ev +++ +H+H+l+
  TRIDC5BG033870.28  6 WKRFTCAWKGWREEKTVLndhVKKSRKKVKLTSCGCEAMISLRRRDDGNYEVLRFVCQHTHQLV 69
                       689*********9987666667888889999*******************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 139 aa     Download sequence    
MVIPVWKRFT CAWKGWREEK TVLNDHVKKS RKKVKLTSCG CEAMISLRRR DDGNYEVLRF  60
VCQHTHQLVS TNKKQFTRTN REVSSELRST FLTCHSIDEP LPEKLAYTNW DQERYPEKLV  120
SDRGGNLSPQ SSLLIGQPS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.12e-08FAR1 family protein