PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5BG033220.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | ERF | ||||||||
Protein Properties | Length: 228aa MW: 25062.2 Da PI: 9.291 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 66.5 | 5e-21 | 82 | 131 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr+++ +g+WvAeIr p++ r+r +lg+f+taeeAa a+++a+ +l+g TRIDC5BG033220.2 82 LYRGVRQRH-WGKWVAEIRLPRN---RTRLWLGTFDTAEEAALAYDQAAYRLRG 131 59******9.**********955...5*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 228 aa Download sequence |
LPLHSHLSPT SPFSFPHAAY SGYPYGVQAQ AQTELSPAQM HYIQARLHLQ RQTGQPGQLG 60 PRPQPMKPAS VAAATPPRPQ KLYRGVRQRH WGKWVAEIRL PRNRTRLWLG TFDTAEEAAL 120 AYDQAAYRLR GDAARLNFPD NAASRGPLHA SVDAKLQTLC QNITASKNAK KSASVSSAES 180 SPSPAATTAA DVPEMQQLDF SEAPWDEAAC FALTKYPSYE IDWDSLLV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G22190.1 | 3e-37 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5BG033220.2 |