PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG033220.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 284aa    MW: 30649.1 Da    PI: 7.1953
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG033220.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2667.2e-21108157255
               AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                        y+GVr+++ +g+WvAeIr p++   r+r +lg+f+taeeAa a+++a+ +l+g
  TRIDC5BG033220.1 108 LYRGVRQRH-WGKWVAEIRLPRN---RTRLWLGTFDTAEEAALAYDQAAYRLRG 157
                       59******9.**********955...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    
MAAAIDLSGE DLVRALEPFI REASAPLPLH SHLSPTSPFS FPHAAYSGYP YGVQAQAQTE  60
LSPAQMHYIQ ARLHLQRQTG QPGQLGPRPQ PMKPASVAAA TPPRPQKLYR GVRQRHWGKW  120
VAEIRLPRNR TRLWLGTFDT AEEAALAYDQ AAYRLRGDAA RLNFPDNAAS RGPLHASVDA  180
KLQTLCQNIT ASKNAKKSAS VSASTAAATS STRTSNCSSP SSDEASSSLE SAESSPSPAA  240
TTAADVPEMQ QLDFSEAPWD EAACFALTKY PSYEIDWDSL LATN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78080.15e-40ERF family protein