PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5BG031800.4 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | WRKY | ||||||||
Protein Properties | Length: 231aa MW: 25076.9 Da PI: 4.9702 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 44.8 | 2.4e-14 | 30 | 69 | 22 | 58 |
EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 22 rsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58 r+YYrCt++ gC ++k+v+r++edp +++++Y+geH++ TRIDC5BG031800.4 30 RAYYRCTYQktqGCAATKQVQRADEDPALFDVIYHGEHTC 69 9*******98999*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 231 aa Download sequence |
MASTCQIGIW QRVHSVRLDM FRKELVLLDR AYYRCTYQKT QGCAATKQVQ RADEDPALFD 60 VIYHGEHTCV HKTAAAAGMV QPAGQNPDAQ SLLQSLSSSL TVKTEGLTAA GTQGWSTTTP 120 FSFSSPAVSG MTPAQHHPFS TPSTPENCFV SMPTSLEPSP ATSGSNHMCM TPFHVHSELQ 180 TMVSALVEAT SMPAADTEEA AFSYWGFDDS ALHVNNLDED VNNFDISTFF A |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40740.2 | 3e-14 | WRKY family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5BG031800.4 |