PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC5BG031800.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | WRKY | ||||||||
Protein Properties | Length: 221aa MW: 23936.5 Da PI: 4.6423 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 45.5 | 1.5e-14 | 16 | 59 | 18 | 58 |
-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 18 sefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58 +++ r+YYrCt++ gC ++k+v+r++edp +++++Y+geH++ TRIDC5BG031800.2 16 AQHCRAYYRCTYQktqGCAATKQVQRADEDPALFDVIYHGEHTC 59 6899********98999*************************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 221 aa Download sequence |
MPPWFFFFAV PDLDHAQHCR AYYRCTYQKT QGCAATKQVQ RADEDPALFD VIYHGEHTCV 60 HKTAAAAGMV QPAGQNPDAQ SLLQSLSSSL TVKTEGLTAA GTQGWSTTTP FSFSSPAVSG 120 MTPAQHHPFS TPSTPENCFV SMPTSLEPSP ATSGSNHMCM TPFHVHSELQ TMVSALVEAT 180 SMPAADTEEA AFSYWGFDDS ALHVNNLDED VNNFDISTFF A |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G24110.1 | 3e-15 | WRKY family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC5BG031800.2 |