PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5BG027590.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB | ||||||||
Protein Properties | Length: 339aa MW: 36178 Da PI: 9.5348 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 55.8 | 1e-17 | 21 | 66 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEd+ l ++v ++G ++W++I++ ++ gR++k+c++rw + TRIDC5BG027590.3 21 KGPWSPEEDDALQRLVGRHGARNWSLISKSIP-GRSGKSCRLRWCNQ 66 79******************************.***********985 PP | |||||||
2 | Myb_DNA-binding | 51.8 | 1.9e-16 | 75 | 117 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++T++Ed+ +++a++++G++ W+tIar + gRt++ +k++w++ TRIDC5BG027590.3 75 PFTPDEDDTILRAHARFGNK-WATIARLLS-GRTDNAIKNHWNST 117 89******************.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 339 aa Download sequence |
LPAAMAACRG GGGGKDVDRI KGPWSPEEDD ALQRLVGRHG ARNWSLISKS IPGRSGKSCR 60 LRWCNQLSPQ VEHRPFTPDE DDTILRAHAR FGNKWATIAR LLSGRTDNAI KNHWNSTLKR 120 KYSSSSSASA SPAEDGAAMA DDEDRRPLKR TSSDGYPGLC FSPGSPSGSD LSDSSHQSLP 180 SVMPSAASQQ PHVYRPVARA GGVVVLPTAT PQPPQPSPPS PPPPPPPPAT SLSLSLSLPG 240 LDAPEPAPVA QPMSMPPPPA PVQPAAAPQM PPPPPMPFQL QPPPQPQPRT PAPFNGEFLS 300 MMQEMIRIEV RNYMSGFDPR SPADGVHAAK RMMSMAKIE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G23290.1 | 2e-66 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5BG027590.3 |