PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG027590.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 264aa MW: 30112.6 Da PI: 12.5043

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG027590.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.4	7e-18	18	63	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEd+ l ++v ++G ++W++I++ ++ gR++k+c++rw + TRIDC5BG027590.2 18 KGPWSPEEDDALQRLVGRHGARNWSLISKSIP-GRSGKSCRLRWCNQ 63 79****************************.*********985 PP
2	Myb_DNA-binding	52.3	1.3e-16	72	114	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++T++Ed+ +++a++++G++ W+tIar + gRt++ +k++w++ TRIDC5BG027590.2 72 PFTPDEDDTILRAHARFGNK-WATIARLLS-GRTDNAIKNHWNST 114 89****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 264 aa Download sequence
AMAACRGGGG GKDVDRIKGP WSPEEDDALQ RLVGRHGARN WSLISKSIPG RSGKSCRLRW 60 CNQLSPQVEH RPFTPDEDDT ILRAHARFGN KWATIARLLS GRTDNAIKNH WNSTLKRRHG 120 RRRGPTAAEA DQQRRIPGAV LQPREPVRVG PQRLQPPEPP LRHAIRRLAA AARVPPGGAC 180 RRGLRRRPLL LRRRRSRSPS PCPAWMRPSQ PRWRSLCPCR RHLLLYSPPQ RLRCRRRRPC 240 RSSSSRRRSP SHGRRRPSTG SSCR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G23290.1	3e-63	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG027590.2