PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5BG027150.6 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | WRKY | ||||||||
Protein Properties | Length: 245aa MW: 26553.8 Da PI: 6.7863 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 102.5 | 2.5e-32 | 117 | 172 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 DgynWrKYGqK+vkgsefprsYY+Ct+++Cpvk+kve++ d+++ ei+Y+geHnh+ TRIDC5BG027150.6 117 DGYNWRKYGQKQVKGSEFPRSYYKCTHPTCPVKRKVETTV-DGQIAEIVYNGEHNHP 172 9***************************************.***************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 245 aa Download sequence |
MQSQEKITPV KPVASRPFSS FTSFSKLLKD FTATGSATIS SPGETVIVRR PKVTRFAPPP 60 SDLSAGIAAT MLQDAGLDTT HEKMVIDPEQ VVSCDQMTAF HDINKPIHGV KNRLSYDGYN 120 WRKYGQKQVK GSEFPRSYYK CTHPTCPVKR KVETTVDGQI AEIVYNGEHN HPQPHPPKKP 180 ASLASTEVVV PDAHGSNDAG AESQLGGCNL ALVSDPVAAA FKSSCDYVDE IGSTSPFPEH 240 VEVVD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G37260.2 | 7e-30 | WRKY family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5BG027150.6 |