PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5BG026550.4 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | LBD | ||||||||
Protein Properties | Length: 155aa MW: 17361.8 Da PI: 7.2071 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 140.4 | 5.7e-44 | 8 | 107 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkae 93 +Ca+Ck+lrr+C++dCv+apyfp e+p++fa vh++FGasnv+k+l++lp +r da+sslvyeA ar+rdPvyG++g i+ lqqq++ql+++ TRIDC5BG026550.4 8 PCASCKLLRRRCTRDCVFAPYFPPEDPHRFATVHRVFGASNVSKMLQELPAAQRADAVSSLVYEATARMRDPVYGCAGAISYLQQQVSQLQVQ 100 7******************************************************************************************** PP DUF260 94 lallkee 100 la++++e TRIDC5BG026550.4 101 LAVAQAE 107 **99987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 155 aa Download sequence |
QTGSSATPCA SCKLLRRRCT RDCVFAPYFP PEDPHRFATV HRVFGASNVS KMLQELPAAQ 60 RADAVSSLVY EATARMRDPV YGCAGAISYL QQQVSQLQVQ LAVAQAELQQ RQVQQQQQMQ 120 MDDDDKAYSS LVMQNDLMST LLLQEACLKK ESLWT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G30130.1 | 3e-52 | LBD family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5BG026550.4 |