PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5BG025740.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | WRKY | ||||||||
Protein Properties | Length: 180aa MW: 20181.5 Da PI: 7.4993 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 64.2 | 2.2e-20 | 90 | 156 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SS......STTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversae......dpkvveitYegeHnhe 59 Dg++WrKYGqK ++ +++prsYY+Ct++ +C+++k v+++++ dp + +++Y g+H+++ TRIDC5BG025740.1 90 YDGHQWRKYGQKIINHTKHPRSYYKCTYKqeqDCRATKTVQQQQQdagvddDPAMYTVVYYGQHTCK 156 59**************************98999********9875222222789***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 180 aa Download sequence |
RAEVVAQMFE SILDCSAKAI AALKLLRLDH SQVDDAVLTA MVDDKTRVRK IVTGDGEKDG 60 DDNAKPLRRQ RKRRRLADDS VALETPVPHY DGHQWRKYGQ KIINHTKHPR SYYKCTYKQE 120 QDCRATKTVQ QQQQDAGVDD DPAMYTVVYY GQHTCKPGQT DAAVVETAST GRCGEGGGEE |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 71 | 75 | RKRRR |
2 | 72 | 76 | KRRRL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46400.1 | 8e-18 | WRKY family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5BG025740.1 |