PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5BG025730.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | WRKY | ||||||||
Protein Properties | Length: 256aa MW: 28562.7 Da PI: 5.1979 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 60.2 | 3.9e-19 | 123 | 168 | 2 | 45 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST..T---EEEEEE-SSST CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa..gCpvkkkversaedp 45 Dg++WrKYGqK+++g +++rsYYrCt++ +C+++k v+++++d+ TRIDC5BG025730.1 123 YDGHQWRKYGQKNINGRQHARSYYRCTYTerNCSATKTVQQQDQDG 168 59**************************999***********9997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 256 aa Download sequence |
DHGLAEIEAL LRREQELVTQ LRALILPQLH NVDSGSAELA VQLFDDVIGC STSVVSKLFT 60 AGSGATTELI DDKSLVRKNS TSTAAAIDDK MDEQARPSCV VGRKRRRNDS KRSRSLVTNV 120 PHYDGHQWRK YGQKNINGRQ HARSYYRCTY TERNCSATKT VQQQDQDGGG SIYSTDAGED 180 QGAKYTVVYY GDHTCKAGDN ISNDIIDHLP NLVDIDLRRG ETERVTAEIS EFEMELDVPA 240 LLEVLNNSQL NWEIVC |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 103 | 107 | RKRRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G66550.2 | 6e-14 | WRKY family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5BG025730.1 |