PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG025720.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WRKY
Protein Properties Length: 240aa    MW: 25725.4 Da    PI: 6.5047
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG025720.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY67.81.6e-2136100359
                       -SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTT.....EEEEEEES--SS- CS
              WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpk.....vveitYegeHnhe 59 
                       Dgy+WrKYGqK+++ +++pr+YYrCt +   gCp+k+ v+r+++d++       +++Y +eH ++
  TRIDC5BG025720.3  36 DGYQWRKYGQKQIEAAKHPRNYYRCTNStnqGCPAKRTVQRNDDDGSddgrpKYTVVYISEHSCK 100
                       9************************9888889**********99986444446889999999886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    
GQRGGAAPAT KATTRCRRKK QGATTTTLVT TVPDFDGYQW RKYGQKQIEA AKHPRNYYRC  60
TNSTNQGCPA KRTVQRNDDD GSDDGRPKYT VVYISEHSCK ATESAAVPVI LETTVRTDTA  120
AAPNVAVVPG SRSGAISSET QSPASSSDIT WSSGGSDGGA NVPPRERDDY SRMFAIEDDC  180
WGWNASPPAP AAAAALLQEM DFDGPIRSPV HVAAADGSWI NDLFVNEPPF VLNSCHLFGL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G24110.11e-14WRKY family protein