PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG025320.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C3H
Protein Properties Length: 430aa    MW: 46719.6 Da    PI: 11.2688
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG025320.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH29.11.8e-09138158526
                       --SGGGGTS--TTTTT-SS-SS CS
           zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                       +C+++ar G+Ck G++C+F H+
  TRIDC5BG025320.6 138 PCMYYAR-GFCKNGSSCRFVHV 158
                       8******.*************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 430 aa     Download sequence    
MDAYEATKVV FARVQALHPD LASKIMGMLL IQDKSEEDMI RLAFGPEHLL HAVVARARAD  60
LAAAHHSKPS SPPTASWGAG MSAEDAPFPG VDQARYEGGG EGFYPPEEFG CWSPASGGQH  120
RRSFSLSDAE AAAGGWKPCM YYARGFCKNG SSCRFVHVLP DHVTEQDTEV WTAAMRSELM  180
SPAFPFSPSP RGGGGGGHAS RRWRRRRHAQ VLRAVASDGP RRRPRLQPRR AADLPDIPGR  240
LHLQRGGRVL LLQLLRAGAG RAHPVPAEAH VRLRHVRVRG DGEAHPRQGE PAFRLRRARP  300
RQALQGKGQG PRQVQEVPGS APWRLRRMHD AHRAARFQGP LRPSVAADRA EDDVRQHWQP  360
RGVPAEEAGG AAAGGGAAAG HRPAEPPLHG AADSRPQEGP PPSRLHCRPA VGSPADRWHR  420
QRQCHSSGGC