PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG025010.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family AP2
Protein Properties Length: 279aa    MW: 30960.1 Da    PI: 4.1412
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG025010.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.66.2e-184193156
               AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                      s+y+GV +++ +grW+A+I  +     +k+ +lg+f+t eeAa+a++ a+ +++g+
  TRIDC5BG025010.6 41 SKYRGVARHHHNGRWEARIGRVLG---NKYLYLGTFDTQEEAARAYDLAAIEYRGA 93
                      89****99**********988422...5*************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MDGRMQVDEY AKERSEMEAV SREEYLAALR RRSSGFSRGV SKYRGVARHH HNGRWEARIG  60
RVLGNKYLYL GTFDTQEEAA RAYDLAAIEY RGANAVTNFD ISRYLDQPQL LAQMEQGPQV  120
VPALQEELQH DQQSDNAVQE LNSGEAQKPG SVNEPIAVDD TDSAGDIGAP LVFDSGVEEN  180
LWSPCMDYDL DPIFGRDISN SMNLSEFFND PTFESNIGYL FEGCPDIDDC STRHGAGLAA  240
LGFLKEGDDN MKDVPDMDAE ITPQANDVSC PPKMITVCN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54320.22e-38ERF family protein