PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG025010.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family AP2
Protein Properties Length: 289aa    MW: 32859.4 Da    PI: 5.245
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG025010.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP240.95.2e-131774455
               AP2  4 kGVrwdkkrgrWvAeIrd.pse...ng.kr.krfslgkfgtaeeAakaaiaarkkleg 55
                      + V +++++gr++A+++d  +    ++ k+ ++++lg ++t+e Aa+a++ a++k++g
  TRIDC5BG025010.4 17 QYVLRHRWTGRFEAHLWDkNCFtsiQNkKKgRQVYLGAYDTEEAAARAYDLAALKYWG 74
                      56889*************5444666335446*************************98 PP
2AP256.66.6e-18117169156
               AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                       s+y+GV +++ +grW+A+I  +     +k+ +lg+f+t eeAa+a++ a+ +++g+
  TRIDC5BG025010.4 117 SKYRGVARHHHNGRWEARIGRVLG---NKYLYLGTFDTQEEAARAYDLAAIEYRGA 169
                       89****99**********988422...5*************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    
PNLGLHVKRS RRLHPCQYVL RHRWTGRFEA HLWDKNCFTS IQNKKKGRQV YLGAYDTEEA  60
AARAYDLAAL KYWGPETTLN FTVDEYAKER SEMEAVSREE YLAALRRRSS GFSRGVSKYR  120
GVARHHHNGR WEARIGRVLG NKYLYLGTFD TQEEAARAYD LAAIEYRGAN AVTNFDISRY  180
LDQPQLLAQM EQGPQVVPAL QEELQHDQQS DNAVQELNSG EAQKPGSVNE PIAVDDTDSA  240
GDIGAPLVFD SGVEENLWSP CMDYDLDPIF GRDISNSMNL SEFFNDPTF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54320.31e-70AP2 family protein