PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG025010.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family AP2
Protein Properties Length: 282aa    MW: 31901.3 Da    PI: 4.7986
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG025010.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP230.11.2e-091367455
               AP2  4 kGVrwdkkrgrWvAeIrdpseng....kr.krfslgkfgtaeeAakaaiaarkkleg 55
                      + V +++++gr++A+++d   n+    ++ k+ + g ++t+e Aa+a++ a++k++g
  TRIDC5BG025010.3 13 QYVLRHRWTGRFEAHLWDK--NCftsiQNkKKGRQGAYDTEEAAARAYDLAALKYWG 67
                      56889**********9993..45656744677778********************98 PP
2AP256.66.3e-18110162156
               AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                       s+y+GV +++ +grW+A+I  +     +k+ +lg+f+t eeAa+a++ a+ +++g+
  TRIDC5BG025010.3 110 SKYRGVARHHHNGRWEARIGRVLG---NKYLYLGTFDTQEEAARAYDLAAIEYRGA 162
                       89****99**********988422...5*************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    
PTLACMSKLH PCQYVLRHRW TGRFEAHLWD KNCFTSIQNK KKGRQGAYDT EEAAARAYDL  60
AALKYWGPET TLNFTVDEYA KERSEMEAVS REEYLAALRR RSSGFSRGVS KYRGVARHHH  120
NGRWEARIGR VLGNKYLYLG TFDTQEEAAR AYDLAAIEYR GANAVTNFDI SRYLDQPQLL  180
AQMEQGPQVV PALQEELQHD QQSDNAVQEL NSGEAQKPGS VNEPIAVDDT DSAGDIGAPL  240
VFDSGVEENL WSPCMDYDLD PIFGRDISNS MNLSEFFNDP TF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54320.33e-66AP2 family protein