PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC5BG025010.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | AP2 | ||||||||
Protein Properties | Length: 84aa MW: 9369.62 Da PI: 11.9431 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 22 | 4.1e-07 | 41 | 69 | 1 | 27 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpseng....k 27 s y+GV++++++gr++A+++d n+ + TRIDC5BG025010.2 41 SIYRGVTRHRWTGRFEAHLWDK--NCftsiQ 69 57****************9993..3333332 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 84 aa Download sequence |
QKAGSAKAKA APKRAKKDAS RRSKESDASA NGAAAAAKRS SIYRGVTRHR WTGRFEAHLW 60 DKNCFTSIQN KKKGRQGKKT HHFF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G54320.3 | 3e-14 | AP2 family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC5BG025010.2 |