PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG025010.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family AP2
Protein Properties Length: 263aa    MW: 29034 Da    PI: 4.1349
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG025010.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.85.7e-182577156
               AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                      s+y+GV +++ +grW+A+I  +     +k+ +lg+f+t eeAa+a++ a+ +++g+
  TRIDC5BG025010.1 25 SKYRGVARHHHNGRWEARIGRVLG---NKYLYLGTFDTQEEAARAYDLAAIEYRGA 77
                      89****99**********988422...5*************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    
MEAVSREEYL AALRRRSSGF SRGVSKYRGV ARHHHNGRWE ARIGRVLGNK YLYLGTFDTQ  60
EEAARAYDLA AIEYRGANAV TNFDISRYLD QPQLLAQMEQ GPQVVPALQE ELQHDQQSDN  120
AVQELNSGEA QKPGSVNEPI AVDDTDSAGD IGAPLVFDSG VEENLWSPCM DYDLDPIFGR  180
DISNSMNLSE FFNDPTFESN IGYLFEGCPD IDDCSTRHGA GLAALGFLKE GDDNMKDVPD  240
MDAEITPQAN DVSCPPKMIT VCN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54320.24e-36ERF family protein