PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG022130.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 262aa    MW: 29668.2 Da    PI: 8.1001
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG022130.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B394.38.3e-3036141198
                       EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 
                       f+k ltpsdv+k++rlv+pk++ae++      +++ e++  l++ede g+ W+++++y+ +s++yvltkGW+++vk+++L++gD+v F++++ 
  TRIDC5BG022130.1  36 FEKPLTPSDVGKLNRLVIPKQHAERYfplnggDSPGEKDLLLSFEDEAGKPWRFRYSYWTSSQSYVLTKGWSRYVKEKQLDAGDIVHFERVRG 128
                       99****************************87445557778999*********************************************8865 PP

                       ..SEE..EEEEE- CS
                B3  88 ..sefelvvkvfr 98 
                         ++ +l+++ +r
  TRIDC5BG022130.1 129 lgTGDRLFIGCRR 141
                       5455556666555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    
MAMHPLSQGH PQAWPWGVAM YTNLHYHHQY EREHLFEKPL TPSDVGKLNR LVIPKQHAER  60
YFPLNGGDSP GEKDLLLSFE DEAGKPWRFR YSYWTSSQSY VLTKGWSRYV KEKQLDAGDI  120
VHFERVRGLG TGDRLFIGCR RRGESAPPPV RVPPPTLNAG EQRPWSPMCY STSGSYPTNP  180
ANSYAYRRSV EQDHSDMLHA GESQREADAK SSTASAPPSR RLRLFGVNLD CGPEPEAEAI  240
TPMYGYTHQS PYAAVATVPS YW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06250.25e-59B3 family protein