PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG021990.3
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family E2F/DP
Protein Properties Length: 414aa    MW: 45664.3 Da    PI: 4.4198
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG021990.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP83.22.2e-26101166171
           E2F_TDP   1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 
                       r+++sL+llt+kfl+ll+ ++ g+v+ln++a++L   +v  ++RRiYDi+NVLe+++liekk kn+irwkg
  TRIDC5BG021990.3 101 RYDSSLGLLTKKFLNLLKGAPGGMVDLNNAAETL---EV--QKRRIYDITNVLEGIGLIEKKLKNNIRWKG 166
                       6899******************************...99..****************************98 PP

Sequence ? help Back to Top
Protein Sequence    Length: 414 aa     Download sequence    
YHHFGPADGG GSADMTEAVV LRTPLKRKHN REDNEVAESN DWMMSPGYAN AANSPIPTPP  60
SGKGSKMSAK PKAAKGQKSC PQTPLFSGSP GNPATPVGGC RYDSSLGLLT KKFLNLLKGA  120
PGGMVDLNNA AETLEVQKRR IYDITNVLEG IGLIEKKLKN NIRWKGIDDS RPGEVSDDMS  180
ILQGDIEALT LQEHSLDGQI SEMRDKLREL TEDENNQKWL YVTEDDIKSL PCFQNQTLIA  240
IKAPHGTTLE VPDPDEVNDY PQRRYRIVLR STMGPIDVYL VSQFEEMSGM ETPPRPAQTI  300
SMDYLENPRT PLATGSNKDV EMENVQQGLI MPPDAPTTHD IGGMMKIVPS ELDTDADYWL  360
LSDTGVSITD MWKTAPDVEW EGIDINAEDF LEVGTPRQQE QPPSEMVDHP SCIS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36010.11e-115E2F/DP family protein