PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG018010.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

WRKY

Protein Properties

Length: 422aa MW: 45692.1 Da PI: 8.3627

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG018010.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	100.4	1.1e-31	154	210	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 dDgynWrKYGqK+vkgs++prsYY+Ct+++Cpvkkkve+++ d+++ ei+Y+g+Hnh+ TRIDC5BG018010.3 154 DDGYNWRKYGQKVVKGSDCPRSYYKCTHPSCPVKKKVEHAE-DGQISEIIYKGKHNHQ 210 8************************************99.*************8 PP
2	WRKY	108.3	3.6e-34	310	368	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct+agC+v+k++er+++dpk+v++tYeg+Hnhe TRIDC5BG018010.3 310 LDDGYRWRKYGQKVVKGNPHPRSYYKCTFAGCNVRKHIERASSDPKAVITTYEGKHNHE 368 59********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 422 aa Download sequence
GSLSQPPPHQ QQQQQERGRG GVARAGPALS VAPPAGAAVF TVPPGLSPSG FFDSPGLIFS 60 PAMGGFGMSH QQALAQVTAQ ASHSPLRMFD HTEQTSFSAA ATSSGALQNM SSAANVAEMS 120 EMATTISNNE HAAFQSAEAS HRYQVPAPVD KPADDGYNWR KYGQKVVKGS DCPRSYYKCT 180 HPSCPVKKKV EHAEDGQISE IIYKGKHNHQ RPPNKRAKDG SSLAAEQNEQ SNDTASGLSG 240 VRRDQEAVYG MSEQLSGLSD GDDKDDGESR PNEADDRESD CKRRNIQISS QKALTESKII 300 VQTTSEVDLL DDGYRWRKYG QKVVKGNPHP RSYYKCTFAG CNVRKHIERA SSDPKAVITT 360 YEGKHNHEPP VGRGSNQNGG NSNRSQQKGP NSMSSNQASH TRTDLGNVNQ GQIGVLQFKR 420 EE

Sequence ? help Back to Top

Protein Sequence Length: 422 aa Download sequence

GSLSQPPPHQ QQQQQERGRG GVARAGPALS VAPPAGAAVF TVPPGLSPSG FFDSPGLIFS  60
PAMGGFGMSH QQALAQVTAQ ASHSPLRMFD HTEQTSFSAA ATSSGALQNM SSAANVAEMS  120
EMATTISNNE HAAFQSAEAS HRYQVPAPVD KPADDGYNWR KYGQKVVKGS DCPRSYYKCT  180
HPSCPVKKKV EHAEDGQISE IIYKGKHNHQ RPPNKRAKDG SSLAAEQNEQ SNDTASGLSG  240
VRRDQEAVYG MSEQLSGLSD GDDKDDGESR PNEADDRESD CKRRNIQISS QKALTESKII  300
VQTTSEVDLL DDGYRWRKYG QKVVKGNPHP RSYYKCTFAG CNVRKHIERA SSDPKAVITT  360
YEGKHNHEPP VGRGSNQNGG NSNRSQQKGP NSMSSNQASH TRTDLGNVNQ GQIGVLQFKR  420
EE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03340.1	1e-112	WRKY family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG018010.3